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1

Least Square Projection: A Fast High-Precision Multidimensional Projection Technique and Its Application to Document Mapping

Paulovich, F.V., Nonato, L.G., Minghim, R., Levkowitz, H.

Journal:

IEEE Transactions on Visualization and Computer Graphics

Year:

2008

Language:

english

File:

PDF, 2.39 MB

english, 2008

2

Seeing beyond reading: a survey on visual text analytics

Alencar, Aretha B., de Oliveira, Maria Cristina F., Paulovich, Fernando V.

Journal:

Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery

Year:

2012

Language:

english

File:

PDF, 743 KB

english, 2012

3

[IEEE 2019 23rd International Conference Information Visualisation (IV) - Paris, France (2019.7.2-2019.7.5)] 2019 23rd International Conference Information Visualisation (IV) - User-guided Dimensionality Reduction Ensembles

Hilasaca, Gladys, Paulovich, Fernando

Year:

2019

Language:

english

File:

PDF, 602 KB

english, 2019

4

Multidimensional Projections for Visual Analysis of Social Networks

Martins, Rafael Messias, Andery, Gabriel Faria, Heberle, Henry, Paulovich, Fernando Vieira, Andrade Lopes, Alneu, Pedrini, Helio, Minghim, Rosane

Journal:

Journal of Computer Science and Technology

Year:

2012

Language:

english

File:

PDF, 7.41 MB

english, 2012

5

Quantifying the human proteome

Paulovich, Amanda G, Whiteaker, Jeffrey R

Journal:

Nature Biotechnology

Year:

2016

Language:

english

File:

PDF, 332 KB

english, 2016

6

RankViz: A visualization framework to assist interpretation of Learning to Rank algorithms

Pereira, Mateus M., Paulovich, Fernando V.

Journal:

Computers & Graphics

Year:

2020

File:

PDF, 4.47 MB

2020

7

Cancer biomarkers: a systems approach

Hartwell, Lee, Mankoff, David, Paulovich, Amanda, Ramsey, Scott, Swisher, Elizabeth

Journal:

Nature Biotechnology

Year:

2006

Language:

english

File:

PDF, 141 KB

english, 2006

8

Biosensors for Efficient Diagnosis of Leishmaniasis: Innovations in Bioanalytics for a Neglected Disease

Perinoto, Ângelo C., Maki, Rafael M., Colhone, Marcelle C., Santos, Fabiana R., Migliaccio, Vanessa, Daghastanli, Katia R., Stabeli, Rodrigo G., Ciancaglini, Pietro, Paulovich, Fernando V., de Olivei

Journal:

Analytical Chemistry

Year:

2010

Language:

english

File:

PDF, 1.47 MB

english, 2010

9

Skeleton-Based Edge Bundling for Graph Visualization

Ersoy, O., Hurter, C., Paulovich, F.V., Cantareiro, G., Telea, A.

Journal:

IEEE Transactions on Visualization and Computer Graphics

Year:

2011

Language:

english

File:

PDF, 3.65 MB

english, 2011

10

Local Affine Multidimensional Projection

Joia, P., Paulovich, F.V., Coimbra, D., Cuminato, J.A., Nonato, L.G.

Journal:

IEEE Transactions on Visualization and Computer Graphics

Year:

2011

Language:

english

File:

PDF, 3.06 MB

english, 2011

11

Nmap: A Novel Neighborhood Preservation Space-filling Algorithm

Duarte, Felipe S. L. G., Sikansi, Fabio, Fatore, Francisco M., Fadel, Samuel G., Paulovich, Fernando V.

Journal:

IEEE Transactions on Visualization and Computer Graphics

Year:

2014

Language:

english

File:

PDF, 2.93 MB

english, 2014

12

Visualizing and Interacting with Kernelized Data

Barbosa, Adriano, Paulovich, Fernando, Paiva, Afonso, Goldenstein, Siome, Petronetto, Fabiano, Nonato, Luis

Journal:

IEEE Transactions on Visualization and Computer Graphics

Year:

2015

Language:

english

File:

PDF, 513 KB

english, 2015

13

MoshViz: A Detail+Overview Approach to Visualize Music Elements

Cantareira, Gabriel D., Nonato, Luis Gustavo, Paulovich, Fernando V.

Journal:

IEEE Transactions on Multimedia

Year:

2016

Language:

english

File:

PDF, 15.17 MB

english, 2016

14

Clinical potential of mass spectrometry-based proteogenomics

Zhang, Bing, Whiteaker, Jeffrey R., Hoofnagle, Andrew N., Baird, Geoffrey S., Rodland, Karin D., Paulovich, Amanda G.

Journal:

Nature Reviews Clinical Oncology (formerly Nature Clinical Practice Oncology)

Year:

2018

Language:

english

File:

PDF, 1.09 MB

english, 2018

15

GENE-19. DEEP PROTEOMIC SURVEY ACROSS SEVEN CHILDHOOD BRAIN TUMORS

Wang, Pei, Tignor, Nicole, Gygi, Steven, Ivey, Richard, Paulovich, Amanda, Nescizhskii, Alexey, Thakurta, Sanjukta Guha, Whiteaker, Jeffery, Kennedy, Jacob, Voytovich, Uliana, Ding, Li, Wang, Liang Bo

Journal:

Year:

2019

Language:

english

File:

PDF, 95 KB

english, 2019

16

Visualization in the preprocessing phase: Getting insights from enterprise professionals

Milani, Alessandra Maciel Paz, Paulovich, Fernando V., Manssour, Isabel Harb

Journal:

Information Visualization

Year:

2020

File:

PDF, 2.87 MB

2020

17

Musica e canti dâespressione popolare di area latino-veneta in Istria e a Zara. Generi vocali e bibliografia

Di Paoli Paulovich, David

Journal:

Histria : the Istrian Historical Society review

Year:

2012

File:

PDF, 665 KB

2012

18

Cerebro-oculo-nasal syndrome: Report of a case with a severe phenotype

Nancy Mizue Kokitsu-Nakata, Siulan Vendramini Paulovich Pittoli, Antonio Richieri da Costa

Journal:

American Journal of Medical Genetics Part A

Year:

2009

Language:

english

File:

PDF, 111 KB

english, 2009

19

Antibody-based enrichment of peptides on magnetic beads for mass-spectrometry-based quantification of serum biomarkers

Jeffrey R. Whiteaker, Lei Zhao, Heidi Y. Zhang, Li-Chia Feng, Brian D. Piening, Leigh Anderson, Amanda G. Paulovich

Journal:

Analytical Biochemistry

Year:

2007

Language:

english

File:

PDF, 611 KB

english, 2007

20

The interface between biomarker discovery and clinical validation: The tar pit of the protein biomarker pipeline

Amanda G. Paulovich, Jeffrey R. Whiteaker, Andrew N. Hoofnagle, Pei Wang

Journal:

PROTEOMICS - Clinical Applications

Year:

2008

Language:

english

File:

PDF, 377 KB

english, 2008

21

Using multidimensional projection techniques for reaching a high distinguishing ability in biosensing

Fernando V. Paulovich, Rafael M. Maki, Maria C. F. de Oliveira, Marcelle C. Colhone, Fabiana R. Santos, Vanessa Migliaccio, Pietro Ciancaglini, Katia R. Perez, Rodrigo G. Stabeli, Ângelo C. Perinoto,

Journal:

Analytical and Bioanalytical Chemistry

Year:

2011

Language:

english

File:

PDF, 313 KB

english, 2011

22

Visual analysis of image collections

Danilo M. Eler, Marcel Y. Nakazaki, Fernando V. Paulovich, Davi P. Santos, Gabriel F. Andery, Maria Cristina F. Oliveira, João Batista Neto, Rosane Minghim

Journal:

The Visual Computer

Year:

2009

Language:

english

File:

PDF, 2.92 MB

english, 2009

23

A Framework for Exploring Multidimensional Data with 3D Projections

J. Poco, R. Etemadpour, F.V. Paulovich, T.V. Long, P. Rosenthal, M.C.F. Oliveira, L. Linsen, R. Minghim

Journal:

Computer Graphics Forum

Year:

2011

Language:

english

File:

PDF, 10.80 MB

english, 2011

24

Piece wise Laplacian-based Projection for Interactive Data Exploration and Organization

F.V. Paulovich, D.M. Eler, J. Poco, C.P. Botha, R. Minghim, L.G. Nonato

Journal:

Computer Graphics Forum

Year:

2011

Language:

english

File:

PDF, 25.82 MB

english, 2011

25

Interlaboratory Evaluation of Automated, Multiplexed Peptide Immunoaffinity Enrichment Coupled to Multiple Reaction Monitoring Mass Spectrometry for Quantifying Proteins in Plasma

Kuhn, E., Whiteaker, J. R., Mani, D. R., Jackson, A. M., Zhao, L., Pope, M. E., Smith, D., Rivera, K. D., Anderson, N. L., Skates, S. J., Pearson, T. W., Paulovich, A. G., Carr, S. A.

Journal:

Molecular & Cellular Proteomics

Year:

2012

Language:

english

File:

PDF, 1.30 MB

english, 2012

26

Multiplexed quantification of estrogen receptor and HER2/Neu in tissue and cell lysates by peptide immunoaffinity enrichment mass spectrometry

Regine M. Schoenherr, Jeffrey R. Whiteaker, Lei Zhao, Richard G. Ivey, Mary Trute, Jacob Kennedy, Uliana J. Voytovich, Ping Yan, Chenwei Lin, Amanda G. Paulovich

Journal:

Year:

2012

Language:

english

File:

PDF, 657 KB

english, 2012

27

Normalized compression distance for visual analysis of document collections

G.P. Telles, R. Minghim, F.V. Paulovich

Journal:

Computers & Graphics

Year:

2007

Language:

english

File:

PDF, 2.12 MB

english, 2007

28

Visual text mining using association rules

A.A. Lopes, R. Pinho, F.V. Paulovich, R. Minghim

Journal:

Computers & Graphics

Year:

2007

Language:

english

File:

PDF, 1.67 MB

english, 2007

29

The Saccharomyces cerevisiae RAD9, RAD17 and RAD24 genes are required for suppression of mutagenic post-replicative repair during chronic DNA damage

Akiko Murakami-Sekimata, Dongqing Huang, Brian D. Piening, Chaitanya Bangur, Amanda G. Paulovich

Journal:

Year:

2010

Language:

english

File:

PDF, 850 KB

english, 2010

30

Automated screening of monoclonal antibodies for SISCAPA assays using a magnetic bead processor and liquid chromatography-selected reaction monitoring-mass spectrometry

Regine M. Schoenherr, Lei Zhao, Jeffrey R. Whiteaker, Li-Chia Feng, Li Li, Lina Liu, Xiuwen Liu, Amanda G. Paulovich

Journal:

Journal of Immunological Methods

Year:

2010

Language:

english

File:

PDF, 669 KB

english, 2010

31

Detection of glucose and triglycerides using information visualization methods to process impedance spectroscopy data

Marli L. Moraes, Laís Petri, Victor Oliveira, Clarissa A. Olivati, Maria Cristina F. de Oliveira, Fernando V. Paulovich, Osvaldo N. Oliveira Jr., Marystela Ferreira

Journal:

Sensors and Actuators B: Chemical

Year:

2012

Language:

english

File:

PDF, 959 KB

english, 2012

32

Lectin Histochemical Study of Lipopigments Present in the Cerebellum of Solanum fastigiatum var. fastigiatum Intoxicated Cattle

F. B. Paulovich, E. L. Portiansky, E. J. Gimeno, A. L. Schild, M. del C. Méndez, F. Riet-Correa

Journal:

Transboundary and Emerging Diseases

Year:

2002

Language:

english

File:

PDF, 298 KB

english, 2002

33

Semantic Wordification of Document Collections

Fernando V. Paulovich, Franklina M. B. Toledo, Guilherme P. Telles, Rosane Minghim, Luis Gustavo Nonato

Journal:

Computer Graphics Forum

Year:

2012

Language:

english

File:

PDF, 2.43 MB

english, 2012

34

Employing 2D Projections for Fast Visual Exploration of Large Fiber Tracking Data

Jorge Poco, Danilo M. Eler, Fernando V. Paulovich, Rosane Minghim

Journal:

Computer Graphics Forum

Year:

2012

Language:

english

File:

PDF, 8.58 MB

english, 2012

35

Acute Type A Aortic Dissection Complicated by Aortic Stent Graft Collapse

Zoltan Szabolcs, Kalman Hüttl, Agnes Laczko, Laszlo Daroczi, Tivadar Hüttl, Erzsebet Paulovich, Istvan Hartyanszky

Journal:

The Annals of Thoracic Surgery

Year:

2009

Language:

english

File:

PDF, 629 KB

english, 2009

36

A visual analysis approach to validate the selection review of primary studies in systematic reviews

Katia R. Felizardo, Gabriel F. Andery, Fernando V. Paulovich, Rosane Minghim, José C. Maldonado

Journal:

Information and Software Technology

Year:

2012

Language:

english

File:

PDF, 2.46 MB

english, 2012

37

When Checkpoints Fail

Amanda G Paulovich, David P Toczyski, Leland H Hartwell

Journal:

Year:

1997

Language:

english

File:

PDF, 173 KB

english, 1997

38

User-Centered Multidimensional Projection Techniques

Silva, Claudio T., Paulovich, Fernando V., Nonato, Luis Gustavo

Journal:

Computing in Science & Engineering

Year:

2012

Language:

english

File:

PDF, 3.85 MB

english, 2012

39

HiPP: A Novel Hierarchical Point Placement Strategy and its Application to the Exploration of Document Collections

Paulovich, F.V., Minghim, R.

Journal:

IEEE Transactions on Visualization and Computer Graphics

Year:

2008

Language:

english

File:

PDF, 1.98 MB

english, 2008

40

Two-Phase Mapping for Projecting Massive Data Sets

Paulovich, F.V., Silva, C.T., Nonato, L.G.

Journal:

IEEE Transactions on Visualization and Computer Graphics

Year:

2010

Language:

english

File:

PDF, 1.64 MB

english, 2010

41

Information Visualization to Enhance Sensitivity and Selectivity in Biosensing

Osvaldo N. Oliveira Jr., Felippe J. Pavinatto, Carlos J. L. Constantino, Fernando V. Paulovich, Maria Cristina F. de Oliveira

Journal:

Year:

2012

Language:

english

File:

PDF, 1.13 MB

english, 2012

42

Quantification of Proteins Using Peptide Immunoaffinity Enrichment Coupled with Mass Spectrometry

Zhao, Lei, Whiteaker, Jeffrey R., Pope, Matthew E., Kuhn, Eric, Jackson, Angela, Anderson, N. Leigh, Pearson, Terry W., Carr, Steven A., Paulovich, Amanda G.

Journal:

Journal of Visualized Experiments

Year:

2011

Language:

english

File:

PDF, 229 KB

english, 2011

43

Strategies to Optimize Biosensors Based on Impedance Spectroscopy to Detect Phytic Acid Using Layer-by-Layer Films

Moraes, Marli L., Maki, Rafael M., Paulovich, Fernando V., Rodrigues Filho, Ubirajara P., de Oliveira, Maria Cristina F., Riul, Antonio, de Souza, Nara C., Ferreira, Marystela, Gomes, Henrique L., Oli

Journal:

Analytical Chemistry

Year:

2010

Language:

english

File:

PDF, 1.71 MB

english, 2010

44

Novel Connections Between DNA Replication, Telomere Homeostasis, and the DNA Damage Response Revealed by a Genome-Wide Screen for TEL1/ATM Interactions in Saccharomyces cerevisiae

Piening, B. D., Huang, D., Paulovich, A. G.

Journal:

Year:

2013

Language:

english

File:

PDF, 2.17 MB

english, 2013

45

On the distinct molecular architectures of dipping- and spray-LbL films containing lipid vesicles

Aoki, Pedro H.B., Alessio, Priscila, Volpati, Diogo, Paulovich, Fernando V., Riul, Antonio, Oliveira, Osvaldo N., Constantino, Carlos J.L.

Journal:

Materials Science and Engineering: C

Year:

2014

Language:

english

File:

PDF, 1.05 MB

english, 2014

46

Peptide Immunoaffinity Enrichment Coupled with Mass Spectrometry for Peptide and Protein Quantification

Whiteaker, Jeffrey R., Paulovich, Amanda G.

Journal:

Clinics in Laboratory Medicine

Year:

2011

Language:

english

File:

PDF, 455 KB

english, 2011

47

High-Affinity Recombinant Antibody Fragments (Fabs) Can Be Applied in Peptide Enrichment Immuno-MRM Assays

Whiteaker, Jeffrey R., Zhao, Lei, Frisch, Christian, Ylera, Francisco, Harth, Stefan, Knappik, Achim, Paulovich, Amanda G.

Journal:

Journal of Proteome Research

Year:

2014

Language:

english

File:

PDF, 1.64 MB

english, 2014

48

Part 1 || Depletion of Yeast Ribosomal Proteins L16 or rp59 Disrupts Ribosome Assembly

Michelle Moritz, Amanda G. Paulovich, Yi-Fang Tsay and John L. Woolford, Jr.

Journal:

The Journal of Cell Biology

Year:

1990

Language:

english

File:

PDF, 2.01 MB

english, 1990

49

36: Proffered Paper: Proteogenomic analysis of human breast cancer connects genetic alterations to phosphorylation networks

Mertins, P., Clauser, K.R., Mani, D.R., Gillette, M., Fenyo, D., Wang, P., Paulovich, A., Ellis, M., Carr, S.A.

Journal:

European Journal of Cancer

Year:

2014

Language:

english

File:

PDF, 66 KB

english, 2014

50

A Platform for Accurate Mass and Time Analyses of Mass Spectrometry Data

May, Damon, Fitzgibbon, Matt, Liu, Yan, Holzman, Ted, Eng, Jimmy, Kemp, C. J., Whiteaker, Jeff, Paulovich, Amanda, McIntosh, Martin

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 424 KB

english, 2007

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